->Keihaninejad S, Zhang H, Ryan N, Malone I, Cardoso M, Modat M, Cash D, Fox N, Ourselin S. ''An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease'', NeuroImage (in press) PMID: 23370057. [[http://dx.doi.org/10.1016/j.neuroimage.2013.01.044|http]] [[http://www.nitrc.org/docman/view.php/207/1240/nimg12LongitudinalDTI.pdf|pdf]]
 

->Keihaninejad S, Zhang H, Ryan N, Malone I, Cardoso M, Modat M, Cash D, Fox N, Ourselin S. ''An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease'', NeuroImage (in press) PMID: 23370057. [[http://dx.doi.org/10.1016/j.neuroimage.2013.01.044 | http]] 
[[http://www.nitrc.org/docman/view.php/207/1240/nimg12LongitudinalDTI.pdf|pdf]]
 

 

->Zhang, H., Awate, S.P., Das, S.R., Woo, J.H., Melhem, E.R., Gee, J.C., Yushkevich, P.A., ''A tract-specific framework for white matter morphometry combining macroscopic and microscopic tract features'', Medical Image Analysis, 14(5), October 2010 [[http://dx.doi.org/10.1016/j.media.2010.05.002|http]]

->Keihaninejad S, Zhang H, Ryan N, Malone I, Cardoso M, Modat M, Cash D, Fox N, Ourselin S. ''An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease'', NeuroImage (in press) PMID 23370057.
[[http://dx.doi.org/10.1016/j.neuroimage.2013.01.044 | http]]
 

->Keihaninejad S, Zhang H, Ryan N, Malone I, Cardoso M, Modat M, Cash D, Fox N, Ourselin S. ''An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease'', NeuroImage (in press) [[http://dx.doi.org/10.1016/j.neuroimage.2013.01.044 | http]]
 

->Zhang, H., Avants, B.B, Yushkevich, P.A., Woo, J.H., Wang, S., McCluskey, L.H., Elman, L.B., Melhem, E.R., Gee, J.C., ''High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis'', IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273.[[http://dx.doi.org/10.1109/TMI.2007.906784|http]] [[http://www.nitrc.org/frs/download.php/1360/zhang07tmi.pdf|pdf]]
 

!!! DTI registration

!! Publications on unbiased longitudinal DTI analysis (NEW!!!)

!! Publications on DTI registration and atlas construction

!! Publications on tract-specific analysis
 
*'''The original tract-specific analysis algorithm for quantifying tissue microstructure'''
->Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, .J.C., ''Structure-specific statistical mapping of white matter tracts'', NeuroImage. 2008 Jun; 41(2):448-61 [[http://dx.doi.org/10.1016/j.neuroimage.2008.01.013|http]]

*'''The tract-specific analysis algorithm for quantifying tract size as well as its microstructure'''
->Zhang, H., Awate, S.P., Das, S.R., Woo, J.H., Melhem, E.R., Gee, J.C., Yushkevich, P.A., ''A tract-specific framework for white matter morphometry combining macroscopic and microscopic tract features'', Medical Image Analysis, 14(5), October 2010 [[http://dx.doi.org/10.1016/j.media.2010.05.002|http]]
 
!! Papers on computational DTI atlases
 

Keihaninejad S, Zhang H, Ryan N, Malone I, Cardoso M, Modat M, Cash D, Fox N, Ourselin S. ''An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease'', NeuroImage (in press) [[http://dx.doi.org/10.1016/j.neuroimage.2013.01.044 | (http)]]
 

!!!! The high-dimensional tensor-based DTI registration algorithm
Zhang, H., Avants, B.B, Yushkevich, P.A., Woo, J.H., Wang, S., McCluskey, L.H., Elman, L.B., Melhem, E.R., Gee, J.C., ''High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis'', IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273. 
[[http://dx.doi.org/10.1109/TMI.2007.906784|http]] [[http://www.nitrc.org/frs/download.php/1360/zhang07tmi.pdf|pdf]]
 
!!!! The unbiased population-based DTI template construction algorithm
Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''Unbiased white matter atlas construction using diffusion tensor images'', MICCAI 2007, Lecture Notes in Computer Science, Volume 4792/2007, 211-218, October 2007. PMID: 18044571. [[http://www.springerlink.com/content/ck57642516h8m654 | http]] [[http://www.nitrc.org/frs/download.php/1358/zhang07miccai.pdf | pdf]]
 
!!!! The original piecewise-affine tensor-based DTI registration algorithm at the core of DTI-TK
Zhang, H., Yushkevich, P.A., Alexander, D.C., Gee, J.C., ''Deformable registration of diffusion tensor MR images with explicit orientation optimization'', Medical Image Analysis, 10(5):764-785, October 2006. PMID: 16899392.  [[http://dx.doi.org/10.1016/j.media.2006.06.004 | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

!!!! The original tract-specific analysis algorithm for quantifying tissue microstructure
Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, .J.C., ''Structure-specific statistical mapping of white matter tracts'', NeuroImage. 2008 Jun; 41(2):448-61 [[http://dx.doi.org/10.1016/j.neuroimage.2008.01.013|http]]
 
!!!! The tract-specific analysis algorithm for quantifying tract size as well as its microstructure
Zhang, H., Awate, S.P., Das, S.R., Woo, J.H., Melhem, E.R., Gee, J.C., Yushkevich, P.A., ''A tract-specific framework for white matter morphometry combining macroscopic and microscopic tract features'', Medical Image Analysis, 14(5), October 2010
[[http://dx.doi.org/10.1016/j.media.2010.05.002|http]]
 

!!!! The computational aging DTI template with support for tract-specific analysis
Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''A computational white matter atlas for aging with surface-based representation of fasciculi'',  International Workshop on Biomedical Image Registration, 6204, Lecture Notes in Computer Science, 83-90, July 2010
[[http://www.springerlink.com/content/k76g013r2k434304|http]]
 
!!!! The computational primate DTI template
Adluru N, Zhang H, Fox AS, Shelton SE, Ennis CM, Bartosic AM, Oler JA, Tromp do PM, Zakszewski E, Gee JC, Kalin NH, Alexander AL. ''A diffusion tensor brain template for rhesus macaques'', NeuroImage 2012 [[http://dx.doi.org/10.1016/j.neuroimage.2011.07.029|http]]

!!Publications on DTI registration and atlas construction
 

Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, .J.C., ''Structure-specific statistical mapping of white matter tracts'', Neuroimage. 2008 Jun; 41(2):448-61 [[http://dx.doi.org/10.1016/j.neuroimage.2008.01.013|http]]
 

Adluru N, Zhang H, Fox AS, Shelton SE, Ennis CM, Bartosic AM, Oler JA, Tromp do PM, Zakszewski E, Gee JC, Kalin NH, Alexander AL. ''A diffusion tensor brain template for rhesus macaques'', NeuroImage 2012 [[http://dx.doi.org/10.1016/j.neuroimage.2011.07.029|http]]

!!!! The original piecewise-affine tensor-based DTI registration algorithm at the core of DTI-TK.

[[http://www.springerlink.com/content/k76g013r2k434304/|http]]
 
!!Related Papers
 
!!! Papers on white matter anatomy
Mori, S., Kaufmann, W.E., Davatzikos, C., Stieltjes, B., Amodei, L., Fredericksen, K., Pearlson, G.D., Melhem, E.R., Solaiyappan, M., Raymond, G.V., Moser, H.W., van Zijl, P.C., ''Imaging Cortical Association Tracts in the Human Brain Using Diffusion-Tensor-Based Axonal Tracking'', Magnetic Resonance in Medicine, 47, 215-223, 2002
 
Mori, S., Oishi, K., Jiang, H., Jiang, L., Li, X., Akhter, K., Hua, K., Faria, A.V., Mahmood, A., Woods, R., Toga, A.W., Pike, G.B., Neto, P.R., Evans, A., Zhang, J., Huang, H., Miller, M.I., van Zijl, P., Mazziotta, J.,  ''Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template'', NeuroImage, 40 (2), 2008
 
Wakana, S., Jiang, H., Nagae-Poetscher, L.M., van Zijl, P.C., Mori, S., {''Fiber Tract–based Atlas of Human White Matter Anatomy'', Radiology, 230 (1), 77-87, 2003

!!! The high-dimensional tensor-based DTI registration algorithm

!!! The unbiased population-based DTI template construction algorithm

!!! The original piecewise-affine tensor-based DTI registration algorithm at the core of DTI-TK.

!!! The original tract-specific analysis algorithm for quantifying tissue microstructure

!!! The tract-specific analysis algorithm for quantifying tract size as well as its microstructure

!!! The computational aging DTI template with support for tract-specific analysis

!!!Papers on white matter anatomy

!!Publications
!!! Papers related to the high-dimensional tensor-based image registration
Zhang, H., Yushkevich, P.A., Alexander, D.C., Gee, J.C., ''Deformable registration of diffusion tensor MR images with explicit orientation optimization'', Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://dx.doi.org/10.1016/j.media.2006.06.004 | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 
!!! Papers related to the white matter atlas construction
Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''Unbiased white matter atlas construction using diffusion tensor images'', MICCAI 2007, Lecture Notes in Computer Science, Volume 4792/2007, 211-218, October 2007. PMID: 18044571. [[http://www.springerlink.com/content/ck57642516h8m654 | http]] [[http://www.nitrc.org/frs/download.php/1358/zhang07miccai.pdf | pdf]]
 
!!! Papers related to the validation of the high-dimensional tensor-based image registration

[[http://dx.doi.org/10.1109/TMI.2007.906784|http]]  [[http://www.nitrc.org/frs/download.php/1360/zhang07tmi.pdf|pdf]]
 
!!! Papers related to the tract-specific analysis

Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''A computational white matter atlas for aging with surface-based representation of fasciculi'',  International Workshop on Biomedical Image Registration, 6204, Lecture Notes in Computer Science, 83-90, July 2010
[[http://www.springerlink.com/content/k76g013r2k434304/|http]]

Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''A Computational White Matter Atlas for Aging with Surface-Based Representation of Fasciculi'',  International Workshop on Biomedical Image Registration, 6204, Lecture Notes in Computer Science, 83-90, July 2010

H., Zhang, P.A., Yushkevich, D., Rueckert, , and J.C., Gee, ''Unbiased white matter atlas construction using diffusion tensor images'', In International Conference on Medical Image Computing and Computer Assisted Intervention, October 2007. PMID: 18044571. [[http://www.springerlink.com/content/ck57642516h8m654 | http]] [[http://www.nitrc.org/frs/download.php/1358/zhang07miccai.pdf | pdf]]
 

H., Zhang, B. B., Avants, P.A., Yushkevich, J.H., Woo, S., Wang, L.F., McCluskey, L.B., Elman, E.R., Melhem, and J.C., Gee, ''High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis'', IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273.
[[ http://dx.doi.org/10.1109/TMI.2007.906784|http]]  [[http://www.nitrc.org/frs/download.php/1360/zhang07tmi.pdf|pdf]]
 

[[ |http]]  [[|pdf]]
 
Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, .J.C., ''Structure-specific statistical mapping of white matter tracts'', Neuroimage. 2008 Jun; 41(2):448-61 [[ |http]]  [[|pdf]]
 

Mori, S., Kaufmann, W.E., Davatzikos, C., Stieltjes, B., Amodei, L., Fredericksen, K., Pearlson, G.D., Melhem, E.R., Solaiyappan, M., Raymond, G.V., Moser, H.W., van Zijl, P.C., ''Imaging Cortical Association Tracts in the Human Brain Using Diffusion-Tensor-Based Axonal Tracking'', Magnetic Resonance in Medicine, 47, 215-223, 2002  [[ |http]]  [[|pdf]]
 
Mori, S., Oishi, K., Jiang, H., Jiang, L., Li, X., Akhter, K., Hua, K., Faria, A.V., Mahmood, A., Woods, R., Toga, A.W., Pike, G.B., Neto, P.R., Evans, A., Zhang, J., Huang, H., Miller, M.I., van Zijl, P., Mazziotta, J.,  ''Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template'', NeuroImage, 40 (2), 2008  [[ |http]]  [[|pdf]]
 
Wakana, S., Jiang, H., Nagae-Poetscher, L.M., van Zijl, P.C., Mori, S., {''Fiber Tract–based Atlas of Human White Matter Anatomy'', Radiology, 230 (1), 77-87, 2003 [ |http]]  [[|pdf]]

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee, ''Deformable registration of diffusion tensor MR images with explicit orientation optimization'', Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

!!References

!Publications
 

Zhang, H., Yushkevich, P.A., Rueckert, D., Gee, J.C., ''A Computational White Matter Atlas for Aging with Surface-Based Representation of Fasciculi'',  International Workshop on Biomedical Image Registration, \textbf{6204}, Lecture Notes in Computer Science, 83-90, July 2010

Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, .J.C., ''Structure-specific statistical mapping of white matter tracts'', Neuroimage. 2008 Jun; 41(2):448-61

[[ http://dx.doi.org/10.1109/TMI.2007.906784|http]]  [[http://www.nitrc.org/frs/download.php/1360/zhang07tmi.pdf|pdf]]

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee, '''''Deformable registration of diffusion tensor MR images with explicit orientation optimization''''', Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D., Rueckert, , and J.C., Gee, '''''Unbiased white matter atlas construction using diffusion tensor images''''', In International Conference on Medical Image Computing and Computer Assisted Intervention, October 2007. PMID: 18044571.

H., Zhang, B. B., Avants, P.A., Yushkevich, J.H., Woo, S., Wang, L.F., McCluskey, L.B., Elman, E.R., Melhem, and J.C., Gee, '''''High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis''''', IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273.

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. '''''Deformable registration of diffusion tensor MR images with explicit orientation optimization'''''. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D., Rueckert, , and J.C., Gee. Unbiased white matter atlas construction using diffusion tensor images. In International Conference on Medical Image Computing and Computer Assisted Intervention, October 2007. PMID: 18044571.

H., Zhang, B. B., Avants, P.A., Yushkevich, J.H., Woo, S., Wang, L.F., McCluskey, L.B., Elman, E.R., Melhem, and J.C., Gee. High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis. IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273.

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. ''''Deformable registration of diffusion tensor MR images with explicit orientation optimization''''. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. ''Deformable registration of diffusion tensor MR images with explicit orientation optimization''. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. ''Deformable registration of diffusion tensor MR images with explicit orientation optimization". Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. ''italics'' Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 

H., Zhang, P.A., Yushkevich, D., Rueckert, , and J.C., Gee. Unbiased white matter atlas construction using diffusion tensor images. In International Conference on Medical Image Computing and Computer Assisted Intervention, October 2007. PMID: 18044571. [ .pdf ]
 
Citation for the validation of the high-dimensional tensor-based image registration
 
[3] H Zhang, B B Avants, P A Yushkevich, J H Woo, S Wang, L F McCluskey, L B Elman, E R Melhem, and J C Gee. High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences in amyotrophic lateral sclerosis. IEEE Transactions on Medical Imaging - Special Issue on Computational Diffusion MRI, 26(11):1585-1597, November 2007. PMID: 18041273.

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http]] [http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]
 

H., Zhang, P.A., Yushkevich, D.C., Alexander, and J.C., Gee. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http] [http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]
 

 
H. Zhang, P. A. Yushkevich, D. C. Alexander, and J. C. Gee. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Asisted intervention - MICCAI 2005, 10(5):764-785, October 2006. Invited submission. PMID: 16899392.  [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6W6Y-4KKNNHK-1&_user=489256&_coverDate=10%2F31%2F2006&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000022721&_version=1&_urlVersion=0&_userid=489256&md5=89c91fd5d5a1a2af206e69e1069b0877&searchtype=a | http] [[http://www.nitrc.org/frs/download.php/1359/zhang06media.pdf | pdf]]
 
Citation for the white matter atlas construction
 
[2] H Zhang, P A Yushkevich, D Rueckert, , and J C Gee. Unbiased white matter atlas construction using diffusion tensor images. In International Conference on Medical Image Computing and Computer Assisted Intervention, October 2007. PMID: 18044571. [ .pdf ]